Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sox3P53784 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sox3P53784 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox3P53784 Gm15794-201ENSMUST00000120182 631 ntBASIC15.68■□□□□ 0.1
Sox3P53784 Gm12895-201ENSMUST00000122214 226 ntBASIC15.68■□□□□ 0.1
Sox3P53784 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox3P53784 Gm9731-201ENSMUST00000209480 747 ntBASIC15.68■□□□□ 0.1
Sox3P53784 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.68■□□□□ 0.1
Sox3P53784 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox3P53784 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox3P53784 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.67■□□□□ 0.1
Sox3P53784 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.67■□□□□ 0.1
Sox3P53784 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.67■□□□□ 0.1
Sox3P53784 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Sox3P53784 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sox3P53784 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox3P53784 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox3P53784 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Gm13216-201ENSMUST00000117145 591 ntBASIC15.66■□□□□ 0.1
Sox3P53784 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox3P53784 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.66■□□□□ 0.1
Sox3P53784 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.66■□□□□ 0.1
Sox3P53784 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Sox3P53784 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox3P53784 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Sox3P53784 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Sox3P53784 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox3P53784 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox3P53784 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox3P53784 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox3P53784 Gm13401-201ENSMUST00000117074 291 ntBASIC15.65■□□□□ 0.1
Sox3P53784 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.65■□□□□ 0.1
Sox3P53784 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.65■□□□□ 0.1
Sox3P53784 Gm7063-201ENSMUST00000186840 981 ntBASIC15.65■□□□□ 0.1
Sox3P53784 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.65■□□□□ 0.1
Sox3P53784 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox3P53784 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sox3P53784 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.64■□□□□ 0.09
Sox3P53784 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms