Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sox1P53783 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox1P53783 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sox1P53783 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.74■□□□□ 0.27
Sox1P53783 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.74■□□□□ 0.27
Sox1P53783 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sox1P53783 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.74■□□□□ 0.27
Sox1P53783 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox1P53783 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.73■□□□□ 0.27
Sox1P53783 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Sox1P53783 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox1P53783 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Sox1P53783 Gm5866-201ENSMUST00000177881 973 ntBASIC16.73■□□□□ 0.27
Sox1P53783 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.73■□□□□ 0.27
Sox1P53783 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.73■□□□□ 0.27
Sox1P53783 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sox1P53783 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.73■□□□□ 0.27
Sox1P53783 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox1P53783 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Sox1P53783 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Sox1P53783 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sox1P53783 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.72■□□□□ 0.27
Sox1P53783 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox1P53783 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sox1P53783 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.72■□□□□ 0.27
Sox1P53783 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sox1P53783 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sox1P53783 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sox1P53783 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.71■□□□□ 0.27
Sox1P53783 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sox1P53783 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.71■□□□□ 0.27
Sox1P53783 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox1P53783 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sox1P53783 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.7■□□□□ 0.26
Sox1P53783 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sox1P53783 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.7■□□□□ 0.26
Sox1P53783 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.7■□□□□ 0.26
Sox1P53783 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox1P53783 Gm8825-201ENSMUST00000182565 998 ntBASIC16.7■□□□□ 0.26
Sox1P53783 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms