Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Ercc3P49135 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc3P49135 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.47■□□□□ 0.71
Ercc3P49135 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.46■□□□□ 0.71
Ercc3P49135 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.46■□□□□ 0.71
Ercc3P49135 Gm29707-201ENSMUST00000196325 491 ntBASIC19.46■□□□□ 0.71
Ercc3P49135 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ercc3P49135 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc3P49135 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.46■□□□□ 0.71
Ercc3P49135 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ercc3P49135 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.45■□□□□ 0.7
Ercc3P49135 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.45■□□□□ 0.7
Ercc3P49135 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.45■□□□□ 0.7
Ercc3P49135 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc3P49135 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ercc3P49135 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ercc3P49135 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ercc3P49135 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.44■□□□□ 0.7
Ercc3P49135 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ercc3P49135 Gm27704-201ENSMUST00000185094 107 ntBASIC19.44■□□□□ 0.7
Ercc3P49135 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.44■□□□□ 0.7
Ercc3P49135 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.44■□□□□ 0.7
Ercc3P49135 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.44■□□□□ 0.7
Ercc3P49135 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc3P49135 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.43■□□□□ 0.7
Ercc3P49135 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ercc3P49135 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.43■□□□□ 0.7
Ercc3P49135 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ercc3P49135 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.43■□□□□ 0.7
Ercc3P49135 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.43■□□□□ 0.7
Ercc3P49135 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ercc3P49135 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.43■□□□□ 0.7
Ercc3P49135 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ercc3P49135 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ercc3P49135 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc3P49135 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ercc3P49135 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms