Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Foxa1P35582 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Foxa1P35582 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Gm7977-201ENSMUST00000193787 748 ntBASIC15.18■□□□□ 0.02
Foxa1P35582 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Foxa1P35582 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Foxa1P35582 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Foxa1P35582 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Foxa1P35582 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Foxa1P35582 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.17■□□□□ 0.02
Foxa1P35582 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Foxa1P35582 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Gm17808-201ENSMUST00000200859 894 ntBASIC15.17■□□□□ 0.02
Foxa1P35582 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Foxa1P35582 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Foxa1P35582 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.17■□□□□ 0.02
Foxa1P35582 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Foxa1P35582 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.16■□□□□ 0.02
Foxa1P35582 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Foxa1P35582 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.16■□□□□ 0.02
Foxa1P35582 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Gm29518-201ENSMUST00000190858 372 ntBASIC15.16■□□□□ 0.02
Foxa1P35582 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Foxa1P35582 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.16■□□□□ 0.02
Foxa1P35582 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Foxa1P35582 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Foxa1P35582 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Foxa1P35582 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Foxa1P35582 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Foxa1P35582 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Foxa1P35582 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Foxa1P35582 Gm11950-201ENSMUST00000121615 838 ntBASIC15.15■□□□□ 0.02
Foxa1P35582 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms