Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Slc6a13P31649 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Slc6a13P31649 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.67■□□□□ 0.26
Slc6a13P31649 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Slc6a13P31649 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.67■□□□□ 0.26
Slc6a13P31649 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Slc6a13P31649 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Slc6a13P31649 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Slc6a13P31649 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slc6a13P31649 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Slc6a13P31649 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.66■□□□□ 0.26
Slc6a13P31649 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Slc6a13P31649 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Slc6a13P31649 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Slc6a13P31649 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.66■□□□□ 0.26
Slc6a13P31649 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Slc6a13P31649 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc6a13P31649 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.65■□□□□ 0.26
Slc6a13P31649 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a13P31649 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gm11950-201ENSMUST00000121615 838 ntBASIC16.65■□□□□ 0.26
Slc6a13P31649 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gm36967-201ENSMUST00000193814 266 ntBASIC16.65■□□□□ 0.26
Slc6a13P31649 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a13P31649 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a13P31649 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Slc6a13P31649 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc6a13P31649 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc6a13P31649 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Gm25016-201ENSMUST00000158399 131 ntBASIC16.64■□□□□ 0.25
Slc6a13P31649 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Slc6a13P31649 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Slc6a13P31649 Gm7977-201ENSMUST00000193787 748 ntBASIC16.64■□□□□ 0.25
Slc6a13P31649 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc6a13P31649 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Slc6a13P31649 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc6a13P31649 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc6a13P31649 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms