Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
P06323 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P06323 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.31□□□□□ -0.28
P06323 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P06323 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
P06323 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
P06323 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P06323 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
P06323 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
P06323 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
P06323 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.3□□□□□ -0.28
P06323 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
P06323 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P06323 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.3□□□□□ -0.28
P06323 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
P06323 Gm8520-201ENSMUST00000186517 868 ntBASIC13.3□□□□□ -0.28
P06323 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.3□□□□□ -0.28
P06323 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.3□□□□□ -0.28
P06323 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P06323 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
P06323 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P06323 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
P06323 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P06323 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P06323 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.29□□□□□ -0.28
P06323 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P06323 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.29□□□□□ -0.28
P06323 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.29□□□□□ -0.28
P06323 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.29□□□□□ -0.28
P06323 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P06323 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
P06323 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P06323 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P06323 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P06323 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.29□□□□□ -0.28
P06323 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
P06323 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.29□□□□□ -0.28
P06323 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
P06323 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P06323 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
P06323 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.28□□□□□ -0.28
P06323 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P06323 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.28□□□□□ -0.28
P06323 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms