Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hdac3O88895 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hdac3O88895 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Hdac3O88895 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.69□□□□□ -0.06
Hdac3O88895 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Hdac3O88895 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.69□□□□□ -0.06
Hdac3O88895 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.69□□□□□ -0.06
Hdac3O88895 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.69□□□□□ -0.06
Hdac3O88895 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Gm5417-201ENSMUST00000079706 384 ntBASIC14.69□□□□□ -0.06
Hdac3O88895 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.69□□□□□ -0.06
Hdac3O88895 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hdac3O88895 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hdac3O88895 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Hdac3O88895 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Hdac3O88895 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hdac3O88895 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hdac3O88895 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hdac3O88895 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hdac3O88895 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hdac3O88895 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Hdac3O88895 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Hdac3O88895 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.67□□□□□ -0.06
Hdac3O88895 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.67□□□□□ -0.06
Hdac3O88895 Gm30025-201ENSMUST00000218555 728 ntBASIC14.67□□□□□ -0.06
Hdac3O88895 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.67□□□□□ -0.06
Hdac3O88895 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.67□□□□□ -0.06
Hdac3O88895 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hdac3O88895 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Hdac3O88895 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.66□□□□□ -0.06
Hdac3O88895 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Hdac3O88895 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hdac3O88895 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.66□□□□□ -0.06
Hdac3O88895 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hdac3O88895 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Hdac3O88895 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.66□□□□□ -0.06
Hdac3O88895 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hdac3O88895 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hdac3O88895 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms