Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20bO88575 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20bO88575 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20bO88575 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20bO88575 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a20bO88575 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Slc6a20bO88575 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a20bO88575 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Gm14701-201ENSMUST00000117156 348 ntBASIC17.85■□□□□ 0.45
Slc6a20bO88575 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a20bO88575 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.84■□□□□ 0.45
Slc6a20bO88575 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a20bO88575 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20bO88575 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20bO88575 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20bO88575 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20bO88575 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20bO88575 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a20bO88575 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc6a20bO88575 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a20bO88575 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Gm25406-201ENSMUST00000157599 105 ntBASIC17.82■□□□□ 0.44
Slc6a20bO88575 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.82■□□□□ 0.44
Slc6a20bO88575 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.82■□□□□ 0.44
Slc6a20bO88575 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.82■□□□□ 0.44
Slc6a20bO88575 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc6a20bO88575 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.81■□□□□ 0.44
Slc6a20bO88575 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.81■□□□□ 0.44
Slc6a20bO88575 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Gm44872-201ENSMUST00000207864 420 ntBASIC17.81■□□□□ 0.44
Slc6a20bO88575 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc6a20bO88575 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms