Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfdp1O88271 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfdp1O88271 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cfdp1O88271 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cfdp1O88271 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC20.43■□□□□ 0.86
Cfdp1O88271 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.43■□□□□ 0.86
Cfdp1O88271 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cfdp1O88271 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Gm12895-201ENSMUST00000122214 226 ntBASIC20.42■□□□□ 0.86
Cfdp1O88271 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.42■□□□□ 0.86
Cfdp1O88271 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.42■□□□□ 0.86
Cfdp1O88271 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cfdp1O88271 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.42■□□□□ 0.86
Cfdp1O88271 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cfdp1O88271 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cfdp1O88271 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.41■□□□□ 0.86
Cfdp1O88271 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Gm27741-201ENSMUST00000185060 237 ntBASIC20.41■□□□□ 0.86
Cfdp1O88271 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cfdp1O88271 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.41■□□□□ 0.86
Cfdp1O88271 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.41■□□□□ 0.86
Cfdp1O88271 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Cfdp1O88271 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cfdp1O88271 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cfdp1O88271 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 Gm13312-201ENSMUST00000119631 718 ntBASIC20.4■□□□□ 0.86
Cfdp1O88271 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.4■□□□□ 0.86
Cfdp1O88271 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.4■□□□□ 0.86
Cfdp1O88271 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cfdp1O88271 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cfdp1O88271 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Cfdp1O88271 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cfdp1O88271 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.39■□□□□ 0.86
Cfdp1O88271 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cfdp1O88271 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.39■□□□□ 0.85
Cfdp1O88271 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.39■□□□□ 0.85
Cfdp1O88271 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.39■□□□□ 0.85
Cfdp1O88271 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cfdp1O88271 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.39■□□□□ 0.85
Cfdp1O88271 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Cfdp1O88271 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.39■□□□□ 0.85
Cfdp1O88271 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.39■□□□□ 0.85
Cfdp1O88271 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cfdp1O88271 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cfdp1O88271 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.38■□□□□ 0.85
Cfdp1O88271 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.38■□□□□ 0.85
Cfdp1O88271 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.38■□□□□ 0.85
Cfdp1O88271 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.38■□□□□ 0.85
Cfdp1O88271 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cfdp1O88271 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms