Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ldb2O55203 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ldb2O55203 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ldb2O55203 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.33■□□□□ 0.21
Ldb2O55203 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ldb2O55203 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ldb2O55203 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ldb2O55203 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ldb2O55203 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ldb2O55203 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ldb2O55203 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.33■□□□□ 0.2
Ldb2O55203 Gm9013-201ENSMUST00000132939 882 ntBASIC16.33■□□□□ 0.2
Ldb2O55203 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.33■□□□□ 0.2
Ldb2O55203 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ldb2O55203 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.33■□□□□ 0.2
Ldb2O55203 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.33■□□□□ 0.2
Ldb2O55203 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ldb2O55203 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ldb2O55203 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ldb2O55203 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.32■□□□□ 0.2
Ldb2O55203 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.32■□□□□ 0.2
Ldb2O55203 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.32■□□□□ 0.2
Ldb2O55203 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.32■□□□□ 0.2
Ldb2O55203 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Gm36967-201ENSMUST00000193814 266 ntBASIC16.32■□□□□ 0.2
Ldb2O55203 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.32■□□□□ 0.2
Ldb2O55203 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.32■□□□□ 0.2
Ldb2O55203 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.32■□□□□ 0.2
Ldb2O55203 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ldb2O55203 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ldb2O55203 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.31■□□□□ 0.2
Ldb2O55203 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ldb2O55203 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.31■□□□□ 0.2
Ldb2O55203 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.31■□□□□ 0.2
Ldb2O55203 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ldb2O55203 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Mir770-201ENSMUST00000103252 94 ntBASIC16.31■□□□□ 0.2
Ldb2O55203 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Gm6659-201ENSMUST00000174752 547 ntBASIC16.31■□□□□ 0.2
Ldb2O55203 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.31■□□□□ 0.2
Ldb2O55203 Gm5587-201ENSMUST00000206270 674 ntBASIC16.31■□□□□ 0.2
Ldb2O55203 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ldb2O55203 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.3■□□□□ 0.2
Ldb2O55203 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ldb2O55203 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ldb2O55203 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ldb2O55203 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.3■□□□□ 0.2
Ldb2O55203 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ldb2O55203 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ldb2O55203 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ldb2O55203 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms