Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ube3aO08759 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.78■□□□□ 0.44
Ube3aO08759 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.78■□□□□ 0.44
Ube3aO08759 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.78■□□□□ 0.44
Ube3aO08759 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Ube3aO08759 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ube3aO08759 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ube3aO08759 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.78■□□□□ 0.44
Ube3aO08759 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ube3aO08759 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ube3aO08759 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.78■□□□□ 0.44
Ube3aO08759 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3aO08759 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3aO08759 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3aO08759 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3aO08759 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3aO08759 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.77■□□□□ 0.44
Ube3aO08759 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Ube3aO08759 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.77■□□□□ 0.44
Ube3aO08759 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3aO08759 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ube3aO08759 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3aO08759 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3aO08759 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3aO08759 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Ube3aO08759 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3aO08759 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3aO08759 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3aO08759 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ube3aO08759 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Ube3aO08759 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ube3aO08759 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.76■□□□□ 0.43
Ube3aO08759 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.76■□□□□ 0.43
Ube3aO08759 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ube3aO08759 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ube3aO08759 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ube3aO08759 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ube3aO08759 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.75■□□□□ 0.43
Ube3aO08759 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Ube3aO08759 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ube3aO08759 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ube3aO08759 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.74■□□□□ 0.43
Ube3aO08759 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.74■□□□□ 0.43
Ube3aO08759 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ube3aO08759 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ube3aO08759 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.74■□□□□ 0.43
Ube3aO08759 Gm18958-201ENSMUST00000174258 762 ntBASIC17.74■□□□□ 0.43
Ube3aO08759 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.74■□□□□ 0.43
Ube3aO08759 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ube3aO08759 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ube3aO08759 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms