Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc149F6V035 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.63■□□□□ 0.25
Ccdc149F6V035 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc149F6V035 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.63■□□□□ 0.25
Ccdc149F6V035 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc149F6V035 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.62■□□□□ 0.25
Ccdc149F6V035 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc149F6V035 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc149F6V035 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Gm18733-201ENSMUST00000173950 856 ntBASIC16.61■□□□□ 0.25
Ccdc149F6V035 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.61■□□□□ 0.25
Ccdc149F6V035 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc149F6V035 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Ccdc149F6V035 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.6■□□□□ 0.25
Ccdc149F6V035 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc149F6V035 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc149F6V035 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Gm6443-201ENSMUST00000203599 874 ntBASIC16.59■□□□□ 0.25
Ccdc149F6V035 Gm6376-201ENSMUST00000209407 580 ntBASIC16.59■□□□□ 0.25
Ccdc149F6V035 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.59■□□□□ 0.25
Ccdc149F6V035 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc149F6V035 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms