Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Gm11127A7VMS2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm11127A7VMS2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm11127A7VMS2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm11127A7VMS2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm11127A7VMS2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm11127A7VMS2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Gm12382-201ENSMUST00000122005 922 ntBASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm11127A7VMS2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Gm12527-201ENSMUST00000117967 564 ntBASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Gm18666-201ENSMUST00000190039 958 ntBASIC14.57□□□□□ -0.08
Gm11127A7VMS2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm11127A7VMS2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Gm37292-201ENSMUST00000192062 758 ntBASIC14.56□□□□□ -0.08
Gm11127A7VMS2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gm11127A7VMS2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Gm11127A7VMS2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm11127A7VMS2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm11127A7VMS2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm11127A7VMS2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm11127A7VMS2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm11127A7VMS2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm11127A7VMS2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.55□□□□□ -0.08
Gm11127A7VMS2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms