Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.33■□□□□ 0.37
Mindy4b-psA0A1W2P7H6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.32■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm36967-201ENSMUST00000193814 266 ntBASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm9103-201ENSMUST00000119371 405 ntBASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm18669-201ENSMUST00000216049 778 ntBASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Mindy4b-psA0A1W2P7H6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms