Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv1A0A0B4J1G7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
Trbv1A0A0B4J1G7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv1A0A0B4J1G7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv1A0A0B4J1G7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.9□□□□□ -0.35
Trbv1A0A0B4J1G7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv1A0A0B4J1G7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
Trbv1A0A0B4J1G7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv1A0A0B4J1G7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms