Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm12527-201ENSMUST00000117967 564 ntBASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.61■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm8520-201ENSMUST00000186517 868 ntBASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Sirpb1aA0A0A6YYP6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sirpb1aA0A0A6YYP6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms