Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6d-5A0A075B6B9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6d-5A0A075B6B9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6d-5A0A075B6B9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6d-5A0A075B6B9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms