Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6n-6A0A075B6B2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6n-6A0A075B6B2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm18025-201ENSMUST00000221733 862 ntBASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6n-6A0A075B6B2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm12382-201ENSMUST00000122005 922 ntBASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Mir2861-201ENSMUST00000175539 82 ntBASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm29791-202ENSMUST00000207888 369 ntBASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Asic1-205ENSMUST00000228185 1818 ntBASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6n-6A0A075B6B2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6n-6A0A075B6B2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6n-6A0A075B6B2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6n-6A0A075B6B2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms