Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12d-3A0A075B6A4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav12d-3A0A075B6A4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm8493-201ENSMUST00000196881 489 ntBASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-3A0A075B6A4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-3A0A075B6A4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms