Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav15-2-dv6-2A0A075B650 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm18666-201ENSMUST00000190039 958 ntBASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm10602-201ENSMUST00000098239 609 ntBASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Prob1-201ENSMUST00000097619 3021 ntBASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15-2-dv6-2A0A075B650 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms