Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-3A0A075B648 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Sybu-209ENSMUST00000228639 4113 ntBASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav12-3A0A075B648 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12□□□□□ -0.49
Trav12-3A0A075B648 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12□□□□□ -0.49
Trav12-3A0A075B648 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Phf7-203ENSMUST00000226565 1971 ntBASIC12□□□□□ -0.49
Trav12-3A0A075B648 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Gm13401-201ENSMUST00000117074 291 ntBASIC12□□□□□ -0.49
Trav12-3A0A075B648 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12□□□□□ -0.49
Trav12-3A0A075B648 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav12-3A0A075B648 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav12-3A0A075B648 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms