Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm45058-201ENSMUST00000205810 766 ntBASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm18959-201ENSMUST00000208954 655 ntBASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-7-dv9A0A075B639 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm11336-201ENSMUST00000118168 334 ntBASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm18421-201ENSMUST00000204122 625 ntBASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6-7-dv9A0A075B639 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6-7-dv9A0A075B639 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-7-dv9A0A075B639 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-7-dv9A0A075B639 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-7-dv9A0A075B639 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-7-dv9A0A075B639 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-7-dv9A0A075B639 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6-7-dv9A0A075B639 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms