Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-4A0A075B631 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav9n-4A0A075B631 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Il3ra-202ENSMUST00000223589 738 ntBASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav9n-4A0A075B631 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav9n-4A0A075B631 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Gm7791-201ENSMUST00000219066 539 ntBASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav9n-4A0A075B631 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-4A0A075B631 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav9n-4A0A075B631 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms