Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13d-1A0A075B606 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Gm29518-201ENSMUST00000190858 372 ntBASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-1A0A075B606 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-1A0A075B606 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Gm6623-201ENSMUST00000173570 544 ntBASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Gm27704-201ENSMUST00000185094 107 ntBASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Gm37722-201ENSMUST00000193757 208 ntBASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav13d-1A0A075B606 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 Gm11950-201ENSMUST00000121615 838 ntBASIC12.04□□□□□ -0.48
Trav13d-1A0A075B606 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms