Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC234782.5-201ENST00000617723 324 ntBASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 AC015726.3-201ENST00000624501 418 ntBASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 AC006065.6-201ENST00000625201 545 ntBASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTDP1Q9Y5B0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 ELF2P3-201ENST00000445099 1506 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 MIR708-201ENST00000390708 88 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 MIR1271-201ENST00000408537 86 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC011933.1-201ENST00000413334 321 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 BOLA3P4-201ENST00000418151 400 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL389915.1-201ENST00000422463 466 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 RSL24D1P6-201ENST00000426934 401 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL512649.1-201ENST00000428997 581 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 MTND3P21-201ENST00000433774 331 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 DNAJC19P4-201ENST00000440115 345 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 MRPL48P1-201ENST00000445390 636 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 PHBP16-201ENST00000446318 950 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 PAXBP1P1-201ENST00000449315 447 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC003071.1-201ENST00000451219 789 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC116533.1-201ENST00000459748 321 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 RN7SL303P-201ENST00000469773 251 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC010618.1-201ENST00000469924 477 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC103987.1-201ENST00000473394 348 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 RPS27P23-201ENST00000487608 251 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 HMGB1P28-201ENST00000507778 552 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 RNU6-314P-201ENST00000516574 104 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 RNU6-1261P-201ENST00000517194 104 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 TRAV15-201ENST00000556680 249 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL020997.2-201ENST00000602607 184 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL596327.1-201ENST00000603629 213 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 IMMP1LP1-201ENST00000605170 488 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL159169.3-201ENST00000608871 561 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC023043.4-201ENST00000612081 449 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 MIR6716-201ENST00000613413 80 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AL359314.1-201ENST00000616913 261 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 ATE1-AS1-202ENST00000636460 506 ntBASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.25□□□□□ -1.57
CTDP1Q9Y5B0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AC125257.1-201ENST00000560400 2930 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 SNORD116-23-201ENST00000384645 92 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 MIR659-201ENST00000384963 97 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 Y_RNA.582-201ENST00000391023 95 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AL139098.1-201ENST00000407291 389 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 TMSB10P2-201ENST00000416049 131 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AC009237.2-201ENST00000421358 284 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 OR8F1P-201ENST00000425243 930 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AC234779.1-201ENST00000425910 285 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 USP9YP18-201ENST00000425912 695 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 MTCO2P19-201ENST00000427513 598 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 RPS29P17-201ENST00000430795 166 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 YWHAQP9-201ENST00000445891 512 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms