Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RN7SKP185-201ENST00000362813 326 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 SNORD50.1-201ENST00000362987 71 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RNA5SP326-201ENST00000363209 110 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 Y_RNA.210-201ENST00000364161 110 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-522P-201ENST00000364497 107 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 Y_RNA.482-201ENST00000384377 111 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 MIR765-201ENST00000390226 114 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RPL21P1-201ENST00000399532 476 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RNU2-20P-201ENST00000410425 191 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 ACTR3BP6-201ENST00000422332 1241 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 SKA2P1-201ENST00000425592 390 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 LSM1P1-201ENST00000438629 273 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AL772161.1-201ENST00000439130 476 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 HMGB3P11-201ENST00000440127 604 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RPL26P28-201ENST00000451325 435 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RPL7AP6-201ENST00000477943 801 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RN7SL97P-201ENST00000486780 299 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC072052.1-201ENST00000496556 306 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC114801.2-201ENST00000503825 781 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 PGAM1P13-201ENST00000507497 754 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC093815.1-201ENST00000508637 280 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 SLC2A13P1-201ENST00000531560 322 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC137627.1-201ENST00000545761 289 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC068831.4-201ENST00000556118 109 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AL049839.1-201ENST00000556151 657 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC130289.1-201ENST00000577321 73 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 IGHV3-29-201ENST00000604817 344 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AL049539.1-201ENST00000611964 459 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC132068.1-201ENST00000623805 459 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AL669831.3-213ENST00000636676 183 ntBASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.16□□□□□ -1.26
PDZRN3Q9UPQ7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 Y_RNA.152-201ENST00000363578 100 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 Y_RNA.222-201ENST00000364264 102 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 U3.12-201ENST00000364498 214 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-996P-201ENST00000365438 107 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-81P-201ENST00000365608 104 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-890P-201ENST00000384121 107 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-769P-201ENST00000384407 104 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 MIR130A-201ENST00000385274 89 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RNU2-14P-201ENST00000411053 191 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 GSTM3P2-201ENST00000412746 530 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AC092832.1-201ENST00000422934 400 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 OR4K11P-201ENST00000431829 904 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AC138761.5-201ENST00000433967 325 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AC104306.1-201ENST00000449702 371 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RPSAP50-201ENST00000481955 852 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 CEACAMP10-202ENST00000495431 496 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-566P-201ENST00000516790 107 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 IGHV3-76-201ENST00000522465 295 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AP001922.4-201ENST00000526967 290 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 MRPS21P7-201ENST00000566937 238 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 MIR4790-201ENST00000577799 79 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 OR4K8P-201ENST00000578842 1048 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 U2.14-201ENST00000615943 113 ntBASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDZRN3Q9UPQ7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PDZRN3Q9UPQ7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PDZRN3Q9UPQ7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
PDZRN3Q9UPQ7 GTF2IP4-201ENST00000453092 2054 ntBASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms