Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AP003717.3-201ENST00000544832 1180 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC074029.1-201ENST00000552531 1044 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AL049874.4-201ENST00000557593 255 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AL451074.6-201ENST00000608512 729 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC026422.1-201ENST00000623961 452 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC139713.2-210ENST00000641741 992 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AL035425.3-201ENST00000564206 4996 ntBASIC2.87□□□□□ -1.95
VPS29Q9UBQ0 AC117529.2-201ENST00000512159 2068 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AL353692.2-201ENST00000407054 335 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AC012498.1-201ENST00000424037 437 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 RPL21P66-201ENST00000426566 466 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AC244505.4-201ENST00000434905 287 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 SSXP5-201ENST00000443473 287 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 RPL34P26-201ENST00000445636 354 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 NECAP1P2-201ENST00000455668 727 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 HMGN1P8-201ENST00000463578 288 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 RPS3AP43-201ENST00000479743 781 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 RN7SL283P-201ENST00000489055 303 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 RN7SL504P-201ENST00000494496 287 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AL358832.1-201ENST00000497800 389 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 RNU6-1073P-201ENST00000517182 106 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 OR4V1P-201ENST00000525394 1140 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AL109653.1-201ENST00000603091 248 ntBASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS29Q9UBQ0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AC110774.1-201ENST00000623567 2018 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AC008264.2-201ENST00000610193 3731 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 SNORA51.4-201ENST00000364993 124 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 RNU4-31P-201ENST00000384211 141 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 MIR34B-201ENST00000385076 84 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 RPL7P46-201ENST00000425129 740 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 RPL23AP69-201ENST00000431134 458 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 RPS27P5-201ENST00000444247 244 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AC044797.1-201ENST00000445744 679 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 RPS15AP1-201ENST00000457423 391 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 snoU13.7-201ENST00000459220 104 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AC117440.1-201ENST00000474107 571 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 RPS29P2-201ENST00000479278 136 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 MTND3P6-201ENST00000485242 339 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 GTF2H2B-203ENST00000508065 1432 ntBASIC2.85□□□□□ -1.95
VPS29Q9UBQ0 FAM35CP-201ENST00000554755 2470 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AP001350.1-201ENST00000601906 1524 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC116096.1-201ENST00000566804 2314 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 SNORA38.1-201ENST00000364172 131 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 RNU6-670P-201ENST00000364312 104 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 SNORA71.1-201ENST00000364523 117 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 SNORA54-201ENST00000384281 123 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 SNORA48.7-201ENST00000391302 135 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 BTBD10P2-201ENST00000404779 676 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 RNU2-6P-201ENST00000411404 190 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 NDUFB4P5-201ENST00000415445 361 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 OR2B8P-201ENST00000432841 938 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC009969.1-201ENST00000438726 172 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 Z99127.2-201ENST00000441426 334 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 RPL21P41-201ENST00000459863 264 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC068724.1-201ENST00000487100 792 ntBASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS29Q9UBQ0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms