Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL590282.1-201ENST00000610379 1136 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 AL590396.2-201ENST00000636511 1041 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 AC046144.1-201ENST00000478559 1853 ntBASIC3□□□□□ -1.93
VAPAQ9P0L0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3□□□□□ -1.93
VAPAQ9P0L0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
VAPAQ9P0L0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 MIR218-2-201ENST00000385006 110 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 MT-TC-201ENST00000387405 66 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 RNU4-78P-201ENST00000410940 126 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 RNU6-272P-201ENST00000411028 104 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC063979.1-201ENST00000415539 377 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 GOT2P5-201ENST00000433995 546 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 RPS27P5-201ENST00000444247 244 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 SSXP4-201ENST00000451349 245 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC010285.1-201ENST00000470580 392 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 POU5F1P7-201ENST00000508759 541 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 TRMT10BP1-201ENST00000519377 943 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC007458.1-201ENST00000542812 373 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC027104.1-201ENST00000563702 681 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 MAGOH2P-202ENST00000584384 429 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AL109659.3-201ENST00000624985 950 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 AL136164.4-201ENST00000625013 2135 ntBASIC2.99□□□□□ -1.93
VAPAQ9P0L0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VAPAQ9P0L0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 SAGE4P-201ENST00000442271 3381 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 ENSAP3-201ENST00000312710 333 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 RNU6-252P-201ENST00000363232 107 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC083799.1-201ENST00000366451 910 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 OR6K3-202ENST00000368146 996 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 DEFB109C-201ENST00000382575 264 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 DEFB109B-201ENST00000382656 264 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 Y_RNA.493-201ENST00000384422 102 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 SAR1AP2-201ENST00000392696 594 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AL353692.2-201ENST00000407054 335 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 RNU6ATAC-201ENST00000408749 126 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC016769.2-201ENST00000414815 475 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC007389.2-201ENST00000434630 306 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 RPS7P2-201ENST00000435134 607 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 HMGB1P15-201ENST00000453854 435 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 RPL21P8-201ENST00000465083 535 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC093663.2-201ENST00000484625 313 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 MTCO3P35-201ENST00000485582 781 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AL024509.2-201ENST00000493462 493 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 CR383656.14-201ENST00000551951 406 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC017100.2-201ENST00000584628 355 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 MIR4506-201ENST00000584693 77 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AP001542.1-201ENST00000591314 200 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC073657.2-201ENST00000605661 303 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC004775.1-201ENST00000607389 753 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC100793.4-201ENST00000613683 429 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AL354976.1-201ENST00000613843 387 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AC009464.1-201ENST00000615731 469 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 AL356118.1-201ENST00000635272 1078 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 Z83843.1-201ENST00000604070 3685 ntBASIC2.98□□□□□ -1.93
VAPAQ9P0L0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VAPAQ9P0L0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 MTND5P19-201ENST00000424872 1794 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 API5P2-201ENST00000397055 1498 ntBASIC2.97□□□□□ -1.93
VAPAQ9P0L0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.97□□□□□ -1.93
VAPAQ9P0L0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms