Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NCKIPSDQ9NZQ3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 RNU1-130P-201ENST00000363930 160 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 RNA5SP515-201ENST00000364570 118 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 SNORA26.8-201ENST00000391306 124 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 SSXP10-201ENST00000402595 565 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AL355379.1-201ENST00000405542 640 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 RNU6-920P-201ENST00000410926 92 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 SNRPFP1-201ENST00000414761 252 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 RPS3AP44-201ENST00000425466 790 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 OR4F13P-201ENST00000428478 931 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC114495.1-201ENST00000441274 436 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AP000936.2-201ENST00000447151 681 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 RPL35P6-201ENST00000490024 372 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 LTV1P1-201ENST00000510683 1237 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 MTCO2P32-201ENST00000514865 403 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AP000790.1-201ENST00000528891 737 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 CYCSP29-201ENST00000533731 318 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AL121766.1-201ENST00000547436 487 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AL161713.1-201ENST00000555538 145 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC012213.3-201ENST00000577199 777 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AF131215.7-201ENST00000602443 707 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC117529.2-201ENST00000512159 2068 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 AC011978.2-201ENST00000569835 2054 ntBASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NCKIPSDQ9NZQ3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 ZNF833P-201ENST00000424938 1494 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AL121657.1-201ENST00000327215 531 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 BTBD10P2-201ENST00000404779 676 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AL023807.1-201ENST00000407932 359 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 Y_RNA.599-201ENST00000410489 109 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 PIGPP2-201ENST00000411569 458 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 SDCBPP2-201ENST00000424643 885 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 RPS25P9-201ENST00000435591 252 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AL512326.1-201ENST00000443050 721 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC239367.2-201ENST00000447309 705 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 MTCO3P2-201ENST00000457365 171 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AL024509.2-201ENST00000493462 493 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 KLRA1P-201ENST00000503499 986 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AC108475.1-201ENST00000507880 950 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AL592156.1-201ENST00000508758 304 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.3□□□□□ -1.72
NCKIPSDQ9NZQ3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms