Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC117522.3-201ENST00000507974 584 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 AC147055.1-201ENST00000509261 750 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 ZNF861P-201ENST00000588126 639 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 CR392039.4-201ENST00000624968 501 ntBASIC2.98□□□□□ -1.93
CISHQ9NSE2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CISHQ9NSE2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.98□□□□□ -1.93
CISHQ9NSE2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CISHQ9NSE2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.97□□□□□ -1.93
CISHQ9NSE2 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CISHQ9NSE2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CISHQ9NSE2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CISHQ9NSE2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.97□□□□□ -1.93
CISHQ9NSE2 AL157700.1-201ENST00000561973 1432 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 AP000567.1-201ENST00000406413 156 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 AL592148.1-201ENST00000413568 445 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 XKRYP4-201ENST00000414395 483 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 AL031736.2-201ENST00000426573 787 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 ELOCP11-201ENST00000436690 332 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 AC107083.1-201ENST00000439643 279 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 ELOCP16-201ENST00000444494 332 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 BUD31P2-201ENST00000449374 300 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 XKRYP5-201ENST00000449659 483 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.97□□□□□ -1.93
CISHQ9NSE2 RPS3AP14-201ENST00000483907 780 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.97□□□□□ -1.93
CISHQ9NSE2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.97□□□□□ -1.93
CISHQ9NSE2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.97□□□□□ -1.93
CISHQ9NSE2 AC010928.3-201ENST00000587712 541 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 AC011468.4-201ENST00000603942 409 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 AC108206.1-201ENST00000570186 4159 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.97□□□□□ -1.93
CISHQ9NSE2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CISHQ9NSE2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.93
CISHQ9NSE2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
CISHQ9NSE2 AC021755.1-201ENST00000559747 1447 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 MIR26A1-201ENST00000362205 77 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 MIR181B1-201ENST00000385240 110 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 MTCO1P45-201ENST00000431457 267 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 MTCO1P43-201ENST00000431831 488 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC087499.2-201ENST00000432861 149 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC009969.1-201ENST00000438726 172 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 RPL31P20-201ENST00000449593 360 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 RNA5SP367-201ENST00000516557 118 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 RN7SKP234-201ENST00000517173 224 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CISHQ9NSE2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC079600.2-201ENST00000550076 130 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC010198.2-201ENST00000550612 259 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 AL033523.1-201ENST00000605153 153 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC113194.1-201ENST00000606037 500 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC018754.1-201ENST00000607486 925 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC112503.1-201ENST00000608436 391 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC005046.1-201ENST00000608515 625 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC092628.2-201ENST00000622492 339 ntBASIC2.96□□□□□ -1.94
CISHQ9NSE2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CISHQ9NSE2 ZNF542P-204ENST00000482727 1305 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CISHQ9NSE2 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 RNU6-666P-201ENST00000363499 107 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 RNU6-356P-201ENST00000384140 107 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 RNA5SP498-201ENST00000411342 120 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 AL356806.1-201ENST00000422524 916 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 NEK4P1-201ENST00000433383 879 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 CBX1P4-201ENST00000439415 457 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 RPS24P13-201ENST00000442520 397 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 RPL5P13-201ENST00000462840 709 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 AC093331.1-201ENST00000521474 169 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CISHQ9NSE2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 EIF4BP1-201ENST00000554881 351 ntBASIC2.95□□□□□ -1.94
CISHQ9NSE2 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.95□□□□□ -1.94
CISHQ9NSE2 MIR3605-201ENST00000583214 100 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms