Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 NDUFB4P5-201ENST00000415445 361 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 PPIAP13-201ENST00000434706 478 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC104651.2-201ENST00000447549 528 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC104634.1-201ENST00000452720 462 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 CACYBPP2-201ENST00000453625 678 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 RN7SL189P-201ENST00000468631 289 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 RPL7AP10-201ENST00000481016 791 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 RPS4XP14-201ENST00000493072 781 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 EIF4EP3-201ENST00000498782 656 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC107934.1-201ENST00000522215 217 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC022616.3-201ENST00000523940 148 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC087241.2-201ENST00000535801 324 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 VN1R84P-201ENST00000593697 235 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC009597.2-201ENST00000604659 592 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC090948.1-201ENST00000607464 549 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC040896.1-201ENST00000613819 479 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AP001642.1-201ENST00000624727 2117 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 AC104623.2-202ENST00000623477 4002 ntBASIC4.68□□□□□ -1.66
SEC61A2Q9H9S3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 PABPC1P6-201ENST00000445594 1829 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 RIOK3P1-201ENST00000418778 1528 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 MTND4P35-201ENST00000604257 1375 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 Y_RNA.216-201ENST00000364205 93 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 Y_RNA.384-201ENST00000383909 102 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 RNU6-738P-201ENST00000384531 106 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC016769.3-201ENST00000396562 315 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 RPL31P52-201ENST00000407532 367 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 MTND3P8-201ENST00000412909 339 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 RPL36AP36-201ENST00000418616 301 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 RPS15AP12-201ENST00000419498 388 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 IFNA20P-201ENST00000436840 528 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 SLC25A18P1-201ENST00000449385 454 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 MTCO3P2-201ENST00000457365 171 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC079168.1-201ENST00000458741 345 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 RPL7P42-201ENST00000481005 679 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 RPL32P9-201ENST00000487963 407 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC034222.1-201ENST00000494052 532 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC090453.1-201ENST00000495560 436 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC093249.1-201ENST00000567049 203 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 MIR3171-201ENST00000584270 74 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AL162431.4-201ENST00000604674 411 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 AC023421.1-201ENST00000590535 1785 ntBASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A2Q9H9S3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms