Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC233981.1-201ENST00000423224 461 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AL451062.2-201ENST00000427515 271 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 YME1L1P1-201ENST00000429435 297 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 RPS26P30-201ENST00000443431 335 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC034236.1-201ENST00000469891 373 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC087312.1-201ENST00000471411 480 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 RN7SL293P-201ENST00000481765 281 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 OR8I1P-201ENST00000529291 931 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AP003049.1-201ENST00000529418 457 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 PDCL2P2-201ENST00000533651 189 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 HMGN2P28-201ENST00000606102 262 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 AC008121.2-201ENST00000614647 523 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 U6.105-201ENST00000637379 88 ntBASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCSER1Q9C0I3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AL133383.2-201ENST00000622958 2336 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 PTGES3P2-201ENST00000407942 482 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 BX664727.1-201ENST00000416024 466 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AL356968.1-201ENST00000416622 474 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC244098.2-201ENST00000422068 99 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AL159987.2-201ENST00000432754 307 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 BX679664.1-201ENST00000434429 253 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC005002.1-201ENST00000447458 540 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AL049829.1-201ENST00000465411 156 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 RPL31P13-201ENST00000484151 370 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 MTCO2P9-201ENST00000503214 694 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 FCF1P8-201ENST00000510322 597 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AP000619.3-201ENST00000535634 1127 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC004217.3-201ENST00000551552 878 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC005476.1-201ENST00000554427 397 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC074051.3-201ENST00000570238 358 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 MIR5047-201ENST00000579212 100 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 U6.98-201ENST00000637157 84 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 PRO1804-201ENST00000623780 2050 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 CR383658.2-201ENST00000547576 1525 ntBASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCSER1Q9C0I3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AC116096.1-201ENST00000566804 2314 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 SNORA63.1-201ENST00000362493 131 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 RNA5SP197-201ENST00000363357 119 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 SNORA51.2-201ENST00000364595 132 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 MIR607-201ENST00000385241 96 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 SNORD65C-201ENST00000390962 71 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 HSPE1P26-201ENST00000405341 275 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 RPL32P14-201ENST00000463196 378 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 RPL5P24-201ENST00000463742 885 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AL355812.1-201ENST00000603215 216 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AC092574.1-201ENST00000609771 420 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AC005156.1-201ENST00000613371 573 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 MIR7975-201ENST00000619350 68 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 AL356321.1-201ENST00000621360 228 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms