Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 RPS12P2-201ENST00000439728 269 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 FABP5P12-201ENST00000515543 389 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 RN7SKP24-201ENST00000515888 284 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 RNA5SP320-201ENST00000516263 124 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 AL136981.2-201ENST00000617319 734 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 AC027290.2-201ENST00000623210 18662 ntBASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CSMD1Q96PZ7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC034244.2-201ENST00000514668 858 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 RNA5SP61-201ENST00000516453 100 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AL022322.2-201ENST00000624072 20397 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 USP8P1-201ENST00000494673 3183 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC010881.1-201ENST00000433830 235 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AL451074.3-201ENST00000437709 472 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 OR6K1P-201ENST00000456766 971 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 ST13P14-201ENST00000474095 734 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AL109741.3-201ENST00000561748 592 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 GTF2H2B-203ENST00000508065 1432 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 RNU1-35P-201ENST00000362782 153 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 RNU1-17P-201ENST00000363022 152 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 RNU6-14P-201ENST00000384630 106 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC245054.2-201ENST00000415639 319 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC091917.2-201ENST00000505002 744 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 SNORA35B-201ENST00000607417 129 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 RMST_9.1-201ENST00000619945 193 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AC027514.1-201ENST00000588561 1603 ntBASIC2.2□□□□□ -2.06
CSMD1Q96PZ7 AL592494.2-201ENST00000425455 1548 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 MIR26A1-201ENST00000362205 77 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 HMGN1P5-201ENST00000448591 263 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC108471.1-201ENST00000513977 287 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 RN7SKP282-201ENST00000516824 299 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC104237.2-201ENST00000612456 443 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC020633.1-201ENST00000468439 2247 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC007342.7-201ENST00000624610 2337 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC092436.3-201ENST00000511788 257 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC018630.1-201ENST00000541376 925 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.6-201ENST00000603753 252 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.11-201ENST00000604059 253 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.10-201ENST00000604330 253 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC008162.1-201ENST00000604718 254 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.1-201ENST00000604752 252 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.2-201ENST00000604983 252 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.5-201ENST00000605253 252 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.4-201ENST00000605279 254 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.12-201ENST00000605291 253 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.8-201ENST00000605353 252 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.9-201ENST00000605428 253 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AL670379.7-201ENST00000605823 252 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 SNORD114-26-201ENST00000363543 72 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 RNA5SP88-201ENST00000365560 109 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 RPL21P3-201ENST00000395517 478 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 GTF2IP23-201ENST00000423746 351 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 AC007677.1-201ENST00000445757 515 ntBASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CSMD1Q96PZ7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD1Q96PZ7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms