Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL590128.1-201ENST00000433407 286 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AL161722.2-201ENST00000434731 981 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC008264.1-201ENST00000447612 367 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 RPL5P30-201ENST00000465511 891 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC114324.2-202ENST00000503812 134 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 TBCAP3-201ENST00000512475 312 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 RNU6-470P-201ENST00000515954 104 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.670-201ENST00000516255 105 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC087854.1-201ENST00000519706 414 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC090151.1-201ENST00000520784 730 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 OR8R1P-201ENST00000543943 764 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC104763.2-201ENST00000604179 382 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC006157.1-201ENST00000611750 366 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC243312.2-201ENST00000623340 601 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC005514.1-201ENST00000623521 208 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC073592.6-201ENST00000624271 415 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 AC092747.4-201ENST00000620519 1861 ntBASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
DEPDC4Q8N2C3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.404-201ENST00000383978 102 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.455-201ENST00000384230 98 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.527-201ENST00000384573 102 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AL353133.1-201ENST00000407695 401 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 RN7SKP58-201ENST00000411010 305 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 RNA5SP111-201ENST00000411386 101 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC006509.1-201ENST00000420788 634 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC007562.1-201ENST00000421819 517 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 MRPS21P2-201ENST00000424704 264 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 RPL7P37-201ENST00000425095 738 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 RPL12P46-201ENST00000436610 195 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 CYCSP43-201ENST00000438233 310 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 HIGD1AP11-201ENST00000438361 280 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 GEMIN8P3-201ENST00000445417 720 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 SNORD5.1-201ENST00000458800 75 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 RN7SL221P-201ENST00000466190 281 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 RN7SL70P-201ENST00000478322 302 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 SNORA70.11-201ENST00000515987 138 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 Y_RNA.661-201ENST00000516003 99 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 SNORA70.13-201ENST00000516116 138 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AP006587.4-201ENST00000526053 529 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AL359091.2-201ENST00000609303 556 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 AC211486.4-201ENST00000621495 113 ntBASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.9□□□□□ -1.46
DEPDC4Q8N2C3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 AC232271.1-201ENST00000602455 2715 ntBASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
DEPDC4Q8N2C3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms