Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ENSAP3-201ENST00000312710 333 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 RNU6-805P-201ENST00000365643 106 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 ATF1P1-201ENST00000406040 927 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 RNA5SP229-201ENST00000410809 99 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 RNU4-27P-201ENST00000410889 139 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AL158050.1-201ENST00000416077 457 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC073310.1-201ENST00000423226 1033 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC008065.1-201ENST00000428525 348 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC008155.2-201ENST00000464337 397 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC008565.1-201ENST00000509046 885 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC025768.1-201ENST00000510057 267 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 OR8K2P-201ENST00000524645 927 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 MIR3690-201ENST00000580266 75 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AC015967.1-201ENST00000619893 476 ntBASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC65Q8IXS2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 SNORA7.2-201ENST00000364446 145 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 RNU6-650P-201ENST00000365658 111 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 MIR183-201ENST00000384958 110 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 RNA5SP44-201ENST00000410446 133 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC245291.1-201ENST00000419501 328 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 RPF2P1-201ENST00000424137 906 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC097713.2-201ENST00000430199 356 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 PTP4A1P3-201ENST00000433661 420 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 RPL21P112-201ENST00000434403 463 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AL512661.1-201ENST00000434586 1253 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 TRIM60P18-201ENST00000441518 828 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 VN1R34P-201ENST00000447387 883 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC115115.1-201ENST00000449927 248 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 RPL21P8-201ENST00000465083 535 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 VN1R17P-201ENST00000472048 1090 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 RN7SL442P-201ENST00000473804 320 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC108078.3-201ENST00000502633 489 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 TMEM248P1-201ENST00000510579 951 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 SNORA64.4-201ENST00000516632 81 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 RN7SKP289-201ENST00000517244 295 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC104027.1-201ENST00000521887 300 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC027104.1-201ENST00000563702 681 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC125494.3-201ENST00000602759 455 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC008739.3-201ENST00000603262 127 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 U6.105-201ENST00000637379 88 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 MTCO1P18-201ENST00000455518 1419 ntBASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC65Q8IXS2 AC024341.1-201ENST00000526444 1552 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AL512646.1-201ENST00000269395 1077 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 RNA5SP27-201ENST00000363839 119 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 RPS7P13-201ENST00000413955 498 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 RPL7P59-201ENST00000447700 943 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC017099.1-201ENST00000448261 1028 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 CENPUP2-201ENST00000555897 1186 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC091488.1-201ENST00000604239 660 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 AC004832.5-201ENST00000608677 401 ntBASIC3.6□□□□□ -1.83
CCDC65Q8IXS2 MIR6864-201ENST00000617935 70 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms