Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 AC090772.4-201ENST00000623599 362 ntBASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 AL365440.1-201ENST00000436135 2167 ntBASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.29□□□□□ -1.88
C9orf40Q8IXQ3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 MTND5P31-201ENST00000419366 1374 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 ELL2P4-201ENST00000446870 1376 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 SNORA71.3-201ENST00000362582 128 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 RNU6-707P-201ENST00000364647 95 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 SNORD116-23-201ENST00000384645 92 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 RPS12P23-201ENST00000419579 400 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC006989.1-201ENST00000427212 131 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC017083.1-201ENST00000428093 483 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC073063.1-201ENST00000434352 607 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 VN1R34P-201ENST00000447387 883 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 NDUFA5P7-201ENST00000452914 242 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC084357.1-201ENST00000473404 255 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AP000926.1-201ENST00000479573 241 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC069528.1-202ENST00000482888 637 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 UBE2V1P12-201ENST00000503954 474 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC093755.1-201ENST00000512950 1023 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC016065.2-201ENST00000514530 444 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 OR5AP1P-201ENST00000529730 940 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 OR5B10P-201ENST00000532869 642 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 MTCYBP23-201ENST00000558717 1102 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC074051.3-201ENST00000570238 358 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC245884.10-201ENST00000597355 337 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC009237.15-201ENST00000610252 501 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC105429.2-201ENST00000610567 517 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 AC243312.2-201ENST00000623340 601 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 MIR4496-201ENST00000635896 61 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 MFSD8-245ENST00000641743 948 ntBASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.28□□□□□ -1.88
C9orf40Q8IXQ3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC025125.1-201ENST00000624743 1922 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 DBF4P1-201ENST00000412976 1892 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 FRG1CP-201ENST00000358464 769 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RNU4-51P-201ENST00000364206 140 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-115P-201ENST00000364310 107 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-441P-201ENST00000384545 106 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MIR217-201ENST00000384817 110 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MIR23B-201ENST00000384832 97 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MIR153-1-201ENST00000384914 90 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MIR218-2-201ENST00000385006 110 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AL391417.1-201ENST00000404100 426 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 RN7SKP177-201ENST00000410567 355 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 MTND4P22-201ENST00000413116 1169 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC017079.2-201ENST00000416102 485 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC245052.5-201ENST00000416320 649 ntBASIC3.27□□□□□ -1.89
C9orf40Q8IXQ3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms