Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RPS20P5-201ENST00000434808 360 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MTND6P18-201ENST00000439477 513 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC016691.1-201ENST00000441321 413 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 H2AFZP6-201ENST00000444403 394 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MRPL48P1-201ENST00000445390 636 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 Z92846.1-201ENST00000456203 268 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC063943.1-201ENST00000465434 453 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 SCARNA24.1-201ENST00000516465 137 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC022690.1-201ENST00000526681 550 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AP004607.2-201ENST00000533949 322 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC079075.1-201ENST00000559543 878 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 GLUD1P4-201ENST00000590914 418 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 AC087283.1-201ENST00000604029 1074 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MIR6820-201ENST00000611508 62 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.84□□□□□ -1.47
NPAS4Q8IUM7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NPAS4Q8IUM7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
NPAS4Q8IUM7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.48
NPAS4Q8IUM7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NPAS4Q8IUM7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.84□□□□□ -1.48
NPAS4Q8IUM7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.84□□□□□ -1.48
NPAS4Q8IUM7 AC073136.1-201ENST00000449426 2884 ntBASIC5.84□□□□□ -1.48
NPAS4Q8IUM7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RNU6-989P-201ENST00000362756 107 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 Y_RNA.58-201ENST00000362807 102 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 Y_RNA.154-201ENST00000363624 102 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RNU1-59P-201ENST00000364829 162 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RNY3P1-201ENST00000365085 102 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RNY3-201ENST00000365484 102 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RNU6-637P-201ENST00000384050 107 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 Y_RNA.490-201ENST00000384413 102 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RPL23AP38-201ENST00000423801 469 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 EIF1P3-201ENST00000423841 334 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 FABP7P2-201ENST00000429946 379 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC006466.1-201ENST00000438721 289 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC010655.1-201ENST00000449336 292 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC009963.2-201ENST00000453431 138 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AL356010.1-201ENST00000456364 102 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC068305.1-201ENST00000497406 726 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 FGF7P4-201ENST00000509595 295 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 RNU6-1220P-201ENST00000517126 108 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AL133271.1-201ENST00000538229 291 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 HIF1AP1-201ENST00000553642 175 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AL133153.1-201ENST00000557756 303 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 AL160413.1-201ENST00000622780 310 ntBASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.83□□□□□ -1.48
NPAS4Q8IUM7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NPAS4Q8IUM7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms