Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AL645937.1-201ENST00000641739 1652 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 SAGE4P-201ENST00000442271 3381 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 RNA5SP235-201ENST00000365411 114 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 HSFY4P-201ENST00000415994 1181 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 HSFY1P1-201ENST00000423928 1178 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC005300.1-201ENST00000428401 373 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 RSL24D1P8-201ENST00000434442 492 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AL513321.1-201ENST00000441175 761 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC007000.2-201ENST00000442564 487 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC104978.1-201ENST00000449387 391 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 MTND5P8-201ENST00000449817 1083 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 MRPS31P2-201ENST00000451581 518 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 HMGB1P15-201ENST00000453854 435 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 TPRKBP1-201ENST00000456243 481 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC010285.1-201ENST00000470580 392 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AP002884.2-201ENST00000471647 395 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 RPL21P13-201ENST00000488305 481 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 NDUFB9P3-201ENST00000521269 501 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC026333.2-201ENST00000542164 106 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 DUXAP6-201ENST00000553858 601 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AL163153.1-201ENST00000554223 283 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC233266.2-201ENST00000567067 528 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC135178.6-201ENST00000605314 398 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 OR2BH1P-201ENST00000608850 864 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 MIR1264-201ENST00000616374 69 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC018816.2-201ENST00000621460 353 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC006963.1-201ENST00000624003 1052 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AL356118.1-201ENST00000635272 1078 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 AC068647.1-201ENST00000489539 2265 ntBASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
H3F3CQ6NXT2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 RNU6-283P-201ENST00000364788 107 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 DEFB109C-201ENST00000382575 264 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 DEFB109B-201ENST00000382656 264 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 RNU6-883P-201ENST00000384597 107 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 NPM1P10-201ENST00000398310 865 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 OR1AA1P-201ENST00000419597 916 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 MTND1P33-201ENST00000446251 917 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 NPM1P13-201ENST00000452663 865 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 snoU13.24-201ENST00000458998 104 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AP003385.6-201ENST00000531603 374 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC092470.1-201ENST00000546187 132 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AL845331.3-202ENST00000562856 261 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 ATP5F1P7-201ENST00000567330 760 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC006557.5-201ENST00000603126 811 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC011816.2-201ENST00000607089 556 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
H3F3CQ6NXT2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms