Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RPL21P133-201ENST00000443666 476 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC092647.2-201ENST00000452998 253 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC002553.2-201ENST00000453217 340 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 RPS29P33-201ENST00000456717 146 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AP1S2P1-201ENST00000457344 379 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC034222.1-201ENST00000494052 532 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC011626.1-201ENST00000604710 562 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AL669831.3-213ENST00000636676 183 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC022034.1-201ENST00000512867 2156 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RC3H1Q5TC82 AC092125.1-201ENST00000562568 1995 ntBASIC6.88□□□□□ -1.31
RC3H1Q5TC82 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AL158163.1-201ENST00000603915 1649 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 SNURFL-201ENST00000309296 343 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 RNY4P16-201ENST00000364768 94 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 SNORA75B-201ENST00000384053 137 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 Y_RNA.515-201ENST00000384535 112 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 RPL7P60-201ENST00000397636 735 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 CHIAP3-201ENST00000423668 1133 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC092017.2-201ENST00000427600 362 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 OR2AS1P-201ENST00000427827 319 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 HMGB1P9-201ENST00000429856 646 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 RPS20P5-201ENST00000434808 360 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 GSTA11P-201ENST00000452866 669 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC021205.1-201ENST00000468797 348 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC097484.1-201ENST00000471148 389 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC006463.2-201ENST00000473326 348 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC058823.1-201ENST00000485315 474 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 TMEM251P1-201ENST00000503717 318 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC023157.2-201ENST00000540596 141 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AL356432.3-201ENST00000568952 465 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 MIR3910-1-201ENST00000580936 111 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 MIR4424-201ENST00000585257 86 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC093799.2-201ENST00000610062 578 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 AC091905.4-201ENST00000623432 202 ntBASIC6.87□□□□□ -1.31
RC3H1Q5TC82 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RC3H1Q5TC82 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 AC009779.8-201ENST00000641684 4384 ntBASIC6.86□□□□□ -1.31
RC3H1Q5TC82 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 AL121886.1-201ENST00000358609 435 ntBASIC6.86□□□□□ -1.31
RC3H1Q5TC82 Y_RNA.350-201ENST00000365409 98 ntBASIC6.86□□□□□ -1.31
RC3H1Q5TC82 Y_RNA.367-201ENST00000365544 101 ntBASIC6.86□□□□□ -1.31
RC3H1Q5TC82 RNU6-903P-201ENST00000391270 109 ntBASIC6.86□□□□□ -1.31
RC3H1Q5TC82 RPL11P3-201ENST00000395256 523 ntBASIC6.86□□□□□ -1.31
RC3H1Q5TC82 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RC3H1Q5TC82 AC245028.1-201ENST00000423259 256 ntBASIC6.86□□□□□ -1.31
RC3H1Q5TC82 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms