Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC011472.4-201ENST00000615848 491 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 AC034229.5-201ENST00000624258 185 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.38□□□□□ -2.03
HIST1H1AQ02539 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.38□□□□□ -2.03
HIST1H1AQ02539 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 METTL21EP-201ENST00000298105 713 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 RNU6-618P-201ENST00000363518 112 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 MIR134-201ENST00000385258 73 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 RNA5SP274-201ENST00000410484 108 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 RNU2-6P-201ENST00000411404 190 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 RPS6P14-201ENST00000425165 719 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 OR51AB1P-201ENST00000429046 620 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 Z96811.1-201ENST00000445880 108 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 ELOCP23-201ENST00000452014 332 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC096992.1-201ENST00000459808 709 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AP004217.1-201ENST00000480579 346 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 RPL21P13-201ENST00000488305 481 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC110794.1-201ENST00000505816 425 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 MTCYBP37-201ENST00000510642 1133 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 SAP18P1-201ENST00000512058 390 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 RN7SL339P-201ENST00000580597 296 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC113368.1-201ENST00000603736 382 ntBASIC2.37□□□□□ -2.03
HIST1H1AQ02539 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.37□□□□□ -2.03
HIST1H1AQ02539 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 FAM35BP-202ENST00000497389 3337 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 RPL31P1-201ENST00000398116 372 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 RNU2-21P-201ENST00000410368 188 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 RPS7P15-201ENST00000415804 584 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AL096701.2-201ENST00000416920 238 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 MTATP6P4-201ENST00000427725 675 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 ELOCP3-201ENST00000439303 348 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC108734.1-201ENST00000439549 399 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 RPS12P18-201ENST00000442381 270 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 FAM133DP-201ENST00000464802 691 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 HMGB1P25-201ENST00000468402 607 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC020898.1-201ENST00000474167 787 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 RN7SL293P-201ENST00000481765 281 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC006499.5-201ENST00000505037 514 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 SNORA31.1-201ENST00000515993 133 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 SNORA31.5-201ENST00000516190 133 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AP004371.1-201ENST00000525240 214 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 DNAJC8P1-201ENST00000554535 372 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC034105.4-201ENST00000568304 277 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC012182.1-201ENST00000570133 895 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 ZNF415P1-201ENST00000582279 1166 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC006111.3-201ENST00000622137 383 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.36□□□□□ -2.03
HIST1H1AQ02539 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HIST1H1AQ02539 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HIST1H1AQ02539 RNU1-33P-201ENST00000364249 162 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms