Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL591719.1-201ENST00000444669 744 ntBASIC3.85□□□□□ -1.79
CDH13P55290 HMGN2P21-201ENST00000447764 270 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 HMGB3P30-201ENST00000457863 606 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 SYPL1P1-201ENST00000473622 768 ntBASIC3.85□□□□□ -1.79
CDH13P55290 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 AC026412.2-201ENST00000512270 1075 ntBASIC3.85□□□□□ -1.79
CDH13P55290 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 AP003730.1-201ENST00000524605 285 ntBASIC3.85□□□□□ -1.79
CDH13P55290 OR5AK1P-201ENST00000524837 922 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH13P55290 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH13P55290 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 AL512347.1-201ENST00000566420 503 ntBASIC3.85□□□□□ -1.79
CDH13P55290 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 AC119501.1-201ENST00000603646 475 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 AL136295.6-201ENST00000610486 658 ntBASIC3.85□□□□□ -1.79
CDH13P55290 TUSC7.1-201ENST00000610969 165 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AC021755.4-201ENST00000616620 456 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AL445567.2-201ENST00000618935 498 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AP000484.1-201ENST00000620067 1252 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AP000676.4-201ENST00000624659 623 ntBASIC3.85□□□□□ -1.79
CDH13P55290 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH13P55290 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 MTND4P34-201ENST00000572715 1371 ntBASIC3.85□□□□□ -1.79
CDH13P55290 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH13P55290 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH13P55290 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH13P55290 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDH13P55290 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH13P55290 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH13P55290 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH13P55290 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH13P55290 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 RNU6-878P-201ENST00000384578 110 ntBASIC3.84□□□□□ -1.79
CDH13P55290 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH13P55290 AC108032.1-201ENST00000416706 207 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AC244098.2-201ENST00000422068 99 ntBASIC3.84□□□□□ -1.79
CDH13P55290 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 RANP8-201ENST00000444720 713 ntBASIC3.84□□□□□ -1.79
CDH13P55290 EXTL2P1-201ENST00000446218 416 ntBASIC3.84□□□□□ -1.79
CDH13P55290 RPS17P13-201ENST00000448974 407 ntBASIC3.84□□□□□ -1.79
CDH13P55290 MTND2P19-201ENST00000449129 1012 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.84□□□□□ -1.79
CDH13P55290 ANKRD26P4-201ENST00000455755 950 ntBASIC3.84□□□□□ -1.79
CDH13P55290 RPS20P24-201ENST00000457473 361 ntBASIC3.84□□□□□ -1.79
CDH13P55290 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH13P55290 AC006463.2-201ENST00000473326 348 ntBASIC3.84□□□□□ -1.79
CDH13P55290 NCOR1P1-202ENST00000486162 291 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AC078817.1-201ENST00000492623 435 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AC092045.1-201ENST00000495716 1231 ntBASIC3.84□□□□□ -1.79
CDH13P55290 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH13P55290 RNA5SP143-201ENST00000516936 115 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AC105185.1-201ENST00000518705 535 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH13P55290 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH13P55290 PDCL2P2-201ENST00000533651 189 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH13P55290 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 DUXAP1-201ENST00000556632 463 ntBASIC3.84□□□□□ -1.79
CDH13P55290 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH13P55290 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.84□□□□□ -1.79
CDH13P55290 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.84□□□□□ -1.79
CDH13P55290 AC005255.1-201ENST00000593748 216 ntBASIC3.84□□□□□ -1.79
CDH13P55290 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH13P55290 AC245297.2-201ENST00000610119 565 ntBASIC3.84□□□□□ -1.79
CDH13P55290 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH13P55290 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.84□□□□□ -1.79
CDH13P55290 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDH13P55290 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDH13P55290 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CDH13P55290 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH13P55290 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDH13P55290 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDH13P55290 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.84□□□□□ -1.8
CDH13P55290 MAPK10-373ENST00000641983 6772 ntBASIC3.84□□□□□ -1.8
CDH13P55290 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDH13P55290 AC106871.1-201ENST00000568324 3102 ntBASIC3.84□□□□□ -1.8
CDH13P55290 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH13P55290 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH13P55290 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH13P55290 RNU6-821P-201ENST00000390995 107 ntBASIC3.83□□□□□ -1.8
CDH13P55290 MIR1284-201ENST00000408337 120 ntBASIC3.83□□□□□ -1.8
CDH13P55290 RNA5SP239-201ENST00000410218 129 ntBASIC3.83□□□□□ -1.8
CDH13P55290 RN7SKP177-201ENST00000410567 355 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms