Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL670379.4-201ENST00000605279 254 ntBASIC6.88□□□□□ -1.31
CLCN1P35523 AC018462.2-201ENST00000605375 395 ntBASIC6.88□□□□□ -1.31
CLCN1P35523 U2.1-201ENST00000618978 145 ntBASIC6.88□□□□□ -1.31
CLCN1P35523 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CLCN1P35523 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.88□□□□□ -1.31
CLCN1P35523 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLCN1P35523 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.88□□□□□ -1.31
CLCN1P35523 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.88□□□□□ -1.31
CLCN1P35523 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CLCN1P35523 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CLCN1P35523 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLCN1P35523 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CLCN1P35523 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.87□□□□□ -1.31
CLCN1P35523 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CLCN1P35523 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CLCN1P35523 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CLCN1P35523 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CLCN1P35523 U3.7-201ENST00000363668 216 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 Y_RNA.257-201ENST00000364596 102 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 Y_RNA.307-201ENST00000365022 117 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 RNU1-84P-201ENST00000365447 164 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 RNU6-128P-201ENST00000383976 107 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 MIR433-201ENST00000384837 93 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 SNORD70.1-201ENST00000391007 85 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 Y_RNA.645-201ENST00000391229 102 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AL583834.1-201ENST00000406943 343 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.87□□□□□ -1.31
CLCN1P35523 RN7SKP281-201ENST00000410472 352 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 GPS2P1-201ENST00000411761 986 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.87□□□□□ -1.31
CLCN1P35523 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN1P35523 GAPDHP37-201ENST00000442317 968 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 RPS24P13-201ENST00000442520 397 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 SETP20-201ENST00000457046 852 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AC053481.1-201ENST00000467217 306 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN1P35523 AC116655.1-201ENST00000508324 901 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.87□□□□□ -1.31
CLCN1P35523 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.87□□□□□ -1.31
CLCN1P35523 AC131935.1-201ENST00000524621 333 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.87□□□□□ -1.31
CLCN1P35523 DYNLL1P4-201ENST00000549314 266 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AC009120.3-201ENST00000563335 499 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AL138889.2-201ENST00000603883 242 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AL121612.2-201ENST00000612261 482 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 AC005899.6-201ENST00000620729 297 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 LINC02495-203ENST00000636704 242 ntBASIC6.87□□□□□ -1.31
CLCN1P35523 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.87□□□□□ -1.31
CLCN1P35523 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLCN1P35523 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN1P35523 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN1P35523 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CLCN1P35523 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN1P35523 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN1P35523 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN1P35523 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN1P35523 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CLCN1P35523 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN1P35523 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CLCN1P35523 RNA5SP85-201ENST00000365378 119 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RNU4-2-201ENST00000365668 141 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 U3.29-201ENST00000391296 212 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 MIR1266-201ENST00000408125 84 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RNU2-21P-201ENST00000410368 188 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RNU2-18P-201ENST00000411224 162 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN1P35523 AL590632.1-201ENST00000424289 371 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 PPIAP3-201ENST00000450588 505 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.86□□□□□ -1.31
CLCN1P35523 AC005165.2-201ENST00000466070 380 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RPS27AP1-201ENST00000475545 471 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RNU6-27P-201ENST00000516146 107 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RNU6-1332P-201ENST00000516666 104 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 RNU6-685P-201ENST00000517088 95 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 Y_RNA.721-201ENST00000517207 102 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN1P35523 AL121576.1-201ENST00000556055 276 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 TPRX1P1-201ENST00000557620 319 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN1P35523 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.86□□□□□ -1.31
CLCN1P35523 NPIPB1P-202ENST00000588786 828 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 AC073046.2-201ENST00000604756 527 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.86□□□□□ -1.31
CLCN1P35523 AC009570.1-201ENST00000609599 745 ntBASIC6.86□□□□□ -1.31
CLCN1P35523 AC062037.2-201ENST00000610137 73 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms