Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
MMP3P08254 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
MMP3P08254 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MMP3P08254 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 AC022031.1-201ENST00000585985 2593 ntBASIC4.33□□□□□ -1.72
MMP3P08254 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.33□□□□□ -1.72
MMP3P08254 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 AL391994.1-201ENST00000254724 282 ntBASIC4.33□□□□□ -1.72
MMP3P08254 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
MMP3P08254 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MMP3P08254 RNU6-931P-201ENST00000363850 107 ntBASIC4.33□□□□□ -1.72
MMP3P08254 SNORD3H-201ENST00000384486 214 ntBASIC4.33□□□□□ -1.72
MMP3P08254 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.33□□□□□ -1.72
MMP3P08254 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.33□□□□□ -1.72
MMP3P08254 MTCO3P1-205ENST00000422088 832 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AC099336.2-201ENST00000422457 254 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.33□□□□□ -1.72
MMP3P08254 IPMKP1-201ENST00000425988 855 ntBASIC4.33□□□□□ -1.72
MMP3P08254 RPP40P1-201ENST00000426762 456 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AL390023.1-201ENST00000428836 262 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.33□□□□□ -1.72
MMP3P08254 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.33□□□□□ -1.72
MMP3P08254 AC073387.1-201ENST00000453261 709 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AC099560.2-201ENST00000457554 255 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.33□□□□□ -1.72
MMP3P08254 ACTG1P13-201ENST00000486987 1043 ntBASIC4.33□□□□□ -1.72
MMP3P08254 OR4G11P-201ENST00000492842 939 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AC006499.5-201ENST00000505037 514 ntBASIC4.33□□□□□ -1.72
MMP3P08254 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.33□□□□□ -1.72
MMP3P08254 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.33□□□□□ -1.72
MMP3P08254 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.33□□□□□ -1.72
MMP3P08254 TRAV15-201ENST00000556680 249 ntBASIC4.33□□□□□ -1.72
MMP3P08254 EIF5A2P1-201ENST00000564027 460 ntBASIC4.33□□□□□ -1.72
MMP3P08254 ISCA1P3-201ENST00000577104 373 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 AC012468.1-201ENST00000604888 430 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AL592221.1-201ENST00000605266 382 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AL353600.1-201ENST00000608148 251 ntBASIC4.33□□□□□ -1.72
MMP3P08254 AC004223.4-201ENST00000612426 332 ntBASIC4.33□□□□□ -1.72
MMP3P08254 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MMP3P08254 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.32□□□□□ -1.72
MMP3P08254 AC107982.1-201ENST00000507171 1300 ntBASIC4.32□□□□□ -1.72
MMP3P08254 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 SNORA4.1-201ENST00000364263 144 ntBASIC4.32□□□□□ -1.72
MMP3P08254 RNU6-621P-201ENST00000364752 109 ntBASIC4.32□□□□□ -1.72
MMP3P08254 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MMP3P08254 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MMP3P08254 RNU6-657P-201ENST00000383904 107 ntBASIC4.32□□□□□ -1.72
MMP3P08254 MIR199A2-201ENST00000385289 110 ntBASIC4.32□□□□□ -1.72
MMP3P08254 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 TMSB4XP8-201ENST00000402089 135 ntBASIC4.32□□□□□ -1.72
MMP3P08254 TMSB4XP6-201ENST00000415187 135 ntBASIC4.32□□□□□ -1.72
MMP3P08254 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 AC008280.1-201ENST00000418851 412 ntBASIC4.32□□□□□ -1.72
MMP3P08254 TMSB4XP1-201ENST00000424567 135 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AL353597.2-202ENST00000434901 373 ntBASIC4.32□□□□□ -1.72
MMP3P08254 ISCA1P2-201ENST00000438679 421 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.32□□□□□ -1.72
MMP3P08254 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.32□□□□□ -1.72
MMP3P08254 MTCO3P16-201ENST00000454456 754 ntBASIC4.32□□□□□ -1.72
MMP3P08254 CCDC75P1-201ENST00000469247 791 ntBASIC4.32□□□□□ -1.72
MMP3P08254 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.32□□□□□ -1.72
MMP3P08254 AC093281.2-201ENST00000510153 597 ntBASIC4.32□□□□□ -1.72
MMP3P08254 OR5BM1P-201ENST00000512021 366 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.32□□□□□ -1.72
MMP3P08254 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.32□□□□□ -1.72
MMP3P08254 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.32□□□□□ -1.72
MMP3P08254 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.32□□□□□ -1.72
MMP3P08254 OR4A12P-201ENST00000530847 918 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.32□□□□□ -1.72
MMP3P08254 MIR3915-201ENST00000578518 97 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.32□□□□□ -1.72
MMP3P08254 AC105129.3-201ENST00000605455 485 ntBASIC4.32□□□□□ -1.72
MMP3P08254 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 AC019176.2-201ENST00000611579 315 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AC005332.6-201ENST00000613178 446 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AL391261.4-201ENST00000616012 481 ntBASIC4.32□□□□□ -1.72
MMP3P08254 AC243756.2-201ENST00000618406 463 ntBASIC4.32□□□□□ -1.72
MMP3P08254 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 AC091965.5-201ENST00000624785 342 ntBASIC4.32□□□□□ -1.72
MMP3P08254 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 AC074029.4-201ENST00000624796 1859 ntBASIC4.32□□□□□ -1.72
MMP3P08254 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
MMP3P08254 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MMP3P08254 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MMP3P08254 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.32□□□□□ -1.72
MMP3P08254 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
MMP3P08254 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.31□□□□□ -1.72
MMP3P08254 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.31□□□□□ -1.72
MMP3P08254 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MMP3P08254 RNU6-984P-201ENST00000363236 109 ntBASIC4.31□□□□□ -1.72
MMP3P08254 RNU6-115P-201ENST00000364310 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms