Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
RNF40O75150 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RNF40O75150 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF40O75150 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RNF40O75150 AC087516.1-201ENST00000561236 2428 ntBASIC6.81□□□□□ -1.32
RNF40O75150 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF40O75150 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RNF40O75150 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RNF40O75150 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RNF40O75150 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.81□□□□□ -1.32
RNF40O75150 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RNF40O75150 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.81□□□□□ -1.32
RNF40O75150 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 Y_RNA.84-201ENST00000363011 104 ntBASIC6.8□□□□□ -1.32
RNF40O75150 RNA5SP433-201ENST00000364491 114 ntBASIC6.8□□□□□ -1.32
RNF40O75150 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 MIR613-201ENST00000385248 95 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL023284.3-201ENST00000407767 334 ntBASIC6.8□□□□□ -1.32
RNF40O75150 RNU6-293P-201ENST00000411259 106 ntBASIC6.8□□□□□ -1.32
RNF40O75150 Z95327.2-201ENST00000414579 1873 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF40O75150 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF40O75150 AC099782.1-201ENST00000425889 474 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF40O75150 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF40O75150 GAPDHP33-201ENST00000443168 1013 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL136097.1-201ENST00000456945 913 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF40O75150 snoU13.29-201ENST00000459370 104 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AC087385.1-201ENST00000475062 312 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL139099.1-201ENST00000497398 403 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AC093815.1-201ENST00000508637 280 ntBASIC6.8□□□□□ -1.32
RNF40O75150 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 CYCSP22-201ENST00000517555 339 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF40O75150 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF40O75150 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 AC109446.1-201ENST00000566172 220 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AC106782.4-201ENST00000568264 210 ntBASIC6.8□□□□□ -1.32
RNF40O75150 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.8□□□□□ -1.32
RNF40O75150 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.8□□□□□ -1.32
RNF40O75150 AC023813.4-201ENST00000607580 580 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AC064801.1-201ENST00000612025 407 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL118522.2-201ENST00000616045 615 ntBASIC6.8□□□□□ -1.32
RNF40O75150 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.8□□□□□ -1.32
RNF40O75150 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 AC069234.4-201ENST00000621276 412 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AP000432.2-201ENST00000624164 2048 ntBASIC6.8□□□□□ -1.32
RNF40O75150 AL136313.1-201ENST00000624804 202 ntBASIC6.8□□□□□ -1.32
RNF40O75150 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RNF40O75150 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
RNF40O75150 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RNF40O75150 AC123769.1-201ENST00000530992 3192 ntBASIC6.79□□□□□ -1.32
RNF40O75150 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
RNF40O75150 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
RNF40O75150 AL121768.1-201ENST00000613917 2544 ntBASIC6.79□□□□□ -1.32
RNF40O75150 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 AL592148.3-201ENST00000608771 2646 ntBASIC6.79□□□□□ -1.32
RNF40O75150 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RNF40O75150 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 SNORA38B-201ENST00000363524 131 ntBASIC6.79□□□□□ -1.32
RNF40O75150 Y_RNA.170-201ENST00000363746 110 ntBASIC6.79□□□□□ -1.32
RNF40O75150 RNU6-960P-201ENST00000364056 120 ntBASIC6.79□□□□□ -1.32
RNF40O75150 RNY3P11-201ENST00000364153 102 ntBASIC6.79□□□□□ -1.32
RNF40O75150 Y_RNA.237-201ENST00000364439 102 ntBASIC6.79□□□□□ -1.32
RNF40O75150 SNORA70.3-201ENST00000365075 132 ntBASIC6.79□□□□□ -1.32
RNF40O75150 RNU1-84P-201ENST00000365447 164 ntBASIC6.79□□□□□ -1.32
RNF40O75150 SNORD50.2-201ENST00000365465 70 ntBASIC6.79□□□□□ -1.32
RNF40O75150 RNU6-611P-201ENST00000384276 104 ntBASIC6.79□□□□□ -1.32
RNF40O75150 AL603910.2-201ENST00000407268 136 ntBASIC6.79□□□□□ -1.32
RNF40O75150 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RNF40O75150 RNU6-1156P-201ENST00000410365 100 ntBASIC6.79□□□□□ -1.32
RNF40O75150 Y_RNA.793-201ENST00000411222 111 ntBASIC6.79□□□□□ -1.32
RNF40O75150 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 CALM2P2-201ENST00000428512 440 ntBASIC6.79□□□□□ -1.32
RNF40O75150 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.79□□□□□ -1.32
RNF40O75150 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RNF40O75150 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.79□□□□□ -1.32
RNF40O75150 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.79□□□□□ -1.32
RNF40O75150 PPP1R11P1-201ENST00000486095 376 ntBASIC6.79□□□□□ -1.32
RNF40O75150 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms