Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.58□□□□□ -1.84
SDC3O75056 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SDC3O75056 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SDC3O75056 UBE3AP2-201ENST00000429033 2259 ntBASIC3.58□□□□□ -1.84
SDC3O75056 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SDC3O75056 OR1L1-202ENST00000373686 1083 ntBASIC3.57□□□□□ -1.84
SDC3O75056 RPL7P27-201ENST00000403775 720 ntBASIC3.57□□□□□ -1.84
SDC3O75056 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SDC3O75056 AC096533.1-201ENST00000411645 353 ntBASIC3.57□□□□□ -1.84
SDC3O75056 RPS7P15-201ENST00000415804 584 ntBASIC3.57□□□□□ -1.84
SDC3O75056 DBIP2-201ENST00000419076 262 ntBASIC3.57□□□□□ -1.84
SDC3O75056 GABPAP-201ENST00000419271 1356 ntBASIC3.57□□□□□ -1.84
SDC3O75056 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.57□□□□□ -1.84
SDC3O75056 SFR1P2-201ENST00000421841 730 ntBASIC3.57□□□□□ -1.84
SDC3O75056 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.57□□□□□ -1.84
SDC3O75056 RPP40P1-201ENST00000426762 456 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AC114973.1-201ENST00000429057 632 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AC012497.1-201ENST00000429392 575 ntBASIC3.57□□□□□ -1.84
SDC3O75056 RPL21P112-201ENST00000434403 463 ntBASIC3.57□□□□□ -1.84
SDC3O75056 RPL26P28-201ENST00000451325 435 ntBASIC3.57□□□□□ -1.84
SDC3O75056 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.57□□□□□ -1.84
SDC3O75056 AC025518.1-201ENST00000479856 347 ntBASIC3.57□□□□□ -1.84
SDC3O75056 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SDC3O75056 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SDC3O75056 NDUFB4P9-201ENST00000511646 388 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.57□□□□□ -1.84
SDC3O75056 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.57□□□□□ -1.84
SDC3O75056 AC103843.2-201ENST00000530523 682 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 OR5D17P-201ENST00000531492 978 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 OR8K4P-201ENST00000534608 872 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.57□□□□□ -1.84
SDC3O75056 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.57□□□□□ -1.84
SDC3O75056 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 ZNF971P-201ENST00000562068 1249 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.57□□□□□ -1.84
SDC3O75056 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.57□□□□□ -1.84
SDC3O75056 BNIP3P27-201ENST00000599991 412 ntBASIC3.57□□□□□ -1.84
SDC3O75056 SNRPGP15-201ENST00000600149 222 ntBASIC3.57□□□□□ -1.84
SDC3O75056 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.57□□□□□ -1.84
SDC3O75056 MIR8058-201ENST00000615737 89 ntBASIC3.57□□□□□ -1.84
SDC3O75056 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SDC3O75056 AC244205.2-202ENST00000635781 342 ntBASIC3.57□□□□□ -1.84
SDC3O75056 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
SDC3O75056 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
SDC3O75056 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SDC3O75056 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SDC3O75056 AL359893.1-201ENST00000447628 1580 ntBASIC3.56□□□□□ -1.84
SDC3O75056 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.56□□□□□ -1.84
SDC3O75056 AL355578.1-201ENST00000607405 1328 ntBASIC3.56□□□□□ -1.84
SDC3O75056 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDC3O75056 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.56□□□□□ -1.84
SDC3O75056 SNORA31-201ENST00000362607 130 ntBASIC3.56□□□□□ -1.84
SDC3O75056 RNA5SP267-201ENST00000364893 126 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AL121972.1-201ENST00000402023 252 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AL355143.1-201ENST00000407101 841 ntBASIC3.56□□□□□ -1.84
SDC3O75056 EI24P1-201ENST00000416584 867 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AL158156.1-201ENST00000422509 473 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.56□□□□□ -1.84
SDC3O75056 CYCSP4-201ENST00000429682 331 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC087650.1-201ENST00000431445 468 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC011742.1-201ENST00000431448 434 ntBASIC3.56□□□□□ -1.84
SDC3O75056 ATP5HP2-201ENST00000433885 485 ntBASIC3.56□□□□□ -1.84
SDC3O75056 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.56□□□□□ -1.84
SDC3O75056 SDR42E1P3-201ENST00000438345 502 ntBASIC3.56□□□□□ -1.84
SDC3O75056 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.56□□□□□ -1.84
SDC3O75056 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.56□□□□□ -1.84
SDC3O75056 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SDC3O75056 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.56□□□□□ -1.84
SDC3O75056 AL136097.1-201ENST00000456945 913 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC008155.2-201ENST00000464337 397 ntBASIC3.56□□□□□ -1.84
SDC3O75056 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.56□□□□□ -1.84
SDC3O75056 AC011352.3-201ENST00000505162 593 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.56□□□□□ -1.84
SDC3O75056 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.56□□□□□ -1.84
SDC3O75056 AC107954.1-201ENST00000565906 727 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC074051.3-201ENST00000570238 358 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC006116.10-201ENST00000591836 581 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.56□□□□□ -1.84
SDC3O75056 AL390816.3-201ENST00000604527 1066 ntBASIC3.56□□□□□ -1.84
SDC3O75056 AL163642.2-201ENST00000604722 1019 ntBASIC3.56□□□□□ -1.84
SDC3O75056 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.56□□□□□ -1.84
SDC3O75056 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.56□□□□□ -1.84
SDC3O75056 AP001002.2-201ENST00000625137 386 ntBASIC3.56□□□□□ -1.84
SDC3O75056 MIR4278-201ENST00000636094 69 ntBASIC3.56□□□□□ -1.84
SDC3O75056 IPO8P1-201ENST00000455509 3109 ntBASIC3.56□□□□□ -1.84
SDC3O75056 TNPO1P3-201ENST00000436471 2662 ntBASIC3.56□□□□□ -1.84
SDC3O75056 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.55□□□□□ -1.84
SDC3O75056 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SDC3O75056 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SDC3O75056 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SDC3O75056 ZNF37BP-203ENST00000452306 1352 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms