Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 HSFY7P-201ENST00000432672 318 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 HSFY8P-201ENST00000437934 318 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 USP9YP22-201ENST00000438971 294 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC28A1O00337 RPS29P31-201ENST00000446147 164 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC112492.1-201ENST00000449607 712 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC28A1O00337 HSFY5P-201ENST00000453726 309 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC28A1O00337 RPS20P24-201ENST00000457473 361 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 RNU7-170P-201ENST00000459303 61 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 snoU109.3-201ENST00000459477 145 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AC026979.1-201ENST00000492525 396 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC28A1O00337 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC28A1O00337 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 RNU6-1261P-201ENST00000517194 104 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AC087808.1-201ENST00000520501 361 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC021451.1-201ENST00000523498 1129 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 OR7E13P-201ENST00000526052 910 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 OR5AP1P-201ENST00000529730 940 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC138915.2-201ENST00000569776 97 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 AL390838.2-201ENST00000602394 274 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC28A1O00337 AL391834.2-201ENST00000609982 546 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AL136295.6-201ENST00000610486 658 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC28A1O00337 AC006329.2-201ENST00000611491 394 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC28A1O00337 MIR4278-201ENST00000636094 69 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 AC099654.9-201ENST00000637055 678 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 USP8P1-201ENST00000494673 3183 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC28A1O00337 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC28A1O00337 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SLC28A1O00337 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC28A1O00337 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC28A1O00337 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC28A1O00337 PRO1804-201ENST00000623780 2050 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
SLC28A1O00337 NUP58P1-201ENST00000502546 1738 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SLC28A1O00337 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC28A1O00337 RPL32P3-201ENST00000359025 275 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC28A1O00337 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC28A1O00337 AL049693.1-201ENST00000402760 611 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 RNU2-37P-201ENST00000410695 177 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 RPL30P2-201ENST00000414021 291 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AC009237.5-201ENST00000414271 501 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC28A1O00337 AC127526.1-201ENST00000417526 366 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC28A1O00337 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC28A1O00337 RPL21P89-201ENST00000444021 467 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 HSFY6P-201ENST00000445573 403 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AC010655.1-201ENST00000449336 292 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC28A1O00337 RPS3AP50-201ENST00000487064 803 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AP001086.1-201ENST00000494882 321 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AC010460.1-201ENST00000507087 466 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC28A1O00337 SCARNA14-201ENST00000516903 136 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC28A1O00337 AP000926.4-201ENST00000527351 454 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.54□□□□□ -1.84
SLC28A1O00337 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC28A1O00337 AC103881.1-201ENST00000603476 538 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC28A1O00337 AP001521.1-201ENST00000609150 300 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AC005344.1-201ENST00000613391 459 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.54□□□□□ -1.84
SLC28A1O00337 AP000553.6-201ENST00000641242 118 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC28A1O00337 AP001350.1-201ENST00000601906 1524 ntBASIC3.54□□□□□ -1.84
SLC28A1O00337 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC28A1O00337 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC28A1O00337 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.53□□□□□ -1.84
SLC28A1O00337 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.84
SLC28A1O00337 GABPAP-201ENST00000419271 1356 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SLC28A1O00337 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SLC28A1O00337 AC126755.2-208ENST00000327792 462 ntBASIC3.53□□□□□ -1.84
SLC28A1O00337 AC138969.1-213ENST00000331436 462 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms