Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL121972.1-201ENST00000402023 252 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL024474.1-201ENST00000404655 591 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 JKAMPP1-201ENST00000413804 919 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 RPL7P30-201ENST00000420888 709 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC006366.1-201ENST00000422002 759 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 RPL23AP74-201ENST00000437246 471 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC006011.1-201ENST00000442758 349 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 USP9YP34-201ENST00000453983 808 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 RNU7-136P-201ENST00000458819 69 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 MEMO1P3-201ENST00000459811 302 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC004069.2-201ENST00000505438 1114 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC093809.1-201ENST00000509155 340 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 KCTD9P2-201ENST00000512203 1013 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC091965.2-201ENST00000512324 613 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC016065.2-201ENST00000514530 444 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 RNU6-150P-201ENST00000516237 95 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 OR4A45P-201ENST00000529954 901 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 GTF2IP22-201ENST00000554443 182 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL133457.1-201ENST00000564251 987 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 U73023.1-201ENST00000603134 700 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC080013.4-201ENST00000607624 649 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC107214.2-201ENST00000608204 634 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AL391497.1-201ENST00000608671 547 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC025588.4-201ENST00000615802 908 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AP000346.3-201ENST00000622821 210 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 AC092656.1-203ENST00000624134 423 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 MTCO1P23-201ENST00000415223 1526 ntBASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.19□□□□□ -1.74
TCRBV7S3A2A0A539 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 OR10J6P-201ENST00000289731 930 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC016769.3-201ENST00000396562 315 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 LAP3P1-201ENST00000403648 294 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 BTBD10P2-201ENST00000404779 676 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 FAR2P2-201ENST00000413041 594 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 TPMTP2-201ENST00000414372 726 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 NPM1P34-201ENST00000428821 893 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AL365184.2-201ENST00000431139 435 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AL358472.1-201ENST00000431295 329 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC096638.2-201ENST00000434965 711 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 SNRPEP7-201ENST00000438350 220 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AL772161.1-201ENST00000439130 476 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 CBX1P1-201ENST00000440184 427 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AL138878.2-201ENST00000440581 1241 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 MTCO1P19-201ENST00000443487 500 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 BMI1P1-201ENST00000445879 941 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AP000936.2-201ENST00000447151 681 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 MTCO1P27-201ENST00000448269 226 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 EPS15P1-201ENST00000448836 336 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 NDUFA12P1-201ENST00000455914 406 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 RNA5SP269-201ENST00000459032 137 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC091564.1-201ENST00000464563 479 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC090453.1-201ENST00000495560 436 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC108941.1-201ENST00000502853 530 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 CBX3P3-201ENST00000508108 532 ntBASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TCRBV7S3A2A0A539 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms