Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 AF117829.1-206ENST00000621883 3802 ntBASIC3.22□□□□□ -1.89
TRBV11-1A0A0K0K1C0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RNA5SP44-201ENST00000410446 133 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RPP40P1-201ENST00000426762 456 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 NPM1P13-201ENST00000452663 865 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 NECAP1P2-201ENST00000455668 727 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 MTND2P30-201ENST00000456663 382 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC004801.2-202ENST00000463559 283 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RPS3AP50-201ENST00000487064 803 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 SETP14-201ENST00000497538 873 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 WBP1LP4-201ENST00000505043 344 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 HMGB1P22-201ENST00000505315 124 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC026784.1-201ENST00000507986 352 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC004062.1-201ENST00000509926 645 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RNU6-1102P-201ENST00000516149 96 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC093331.1-201ENST00000521474 169 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC011611.1-201ENST00000552179 197 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC074051.3-201ENST00000570238 358 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC103881.1-201ENST00000603476 538 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 DPRXP5-201ENST00000604662 539 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC106730.3-201ENST00000624568 641 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 MFSD8-233ENST00000641482 4860 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC005183.1-201ENST00000603687 1979 ntBASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRBV11-1A0A0K0K1C0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 ZNF542P-204ENST00000482727 1305 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC073055.1-201ENST00000456901 1621 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC068647.1-201ENST00000489539 2265 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AL589826.1-201ENST00000340697 249 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 DEFB109C-201ENST00000382575 264 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 DEFB109B-201ENST00000382656 264 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 MIR34B-201ENST00000385076 84 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 BX323014.1-201ENST00000412876 237 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AL445183.3-201ENST00000414168 502 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC017079.2-201ENST00000416102 485 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 OR1AA1P-201ENST00000419597 916 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AL009174.1-201ENST00000426577 416 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC006946.1-201ENST00000429106 328 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC097713.2-201ENST00000430199 356 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RPL12P26-201ENST00000452430 487 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 RPS24P6-201ENST00000452670 400 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC074250.1-201ENST00000511117 192 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC124293.1-201ENST00000530034 493 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 NCAPGP2-201ENST00000557911 754 ntBASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.2□□□□□ -1.9
TRBV11-1A0A0K0K1C0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms