Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 SNORA7.2-201ENST00000364446 145 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AL121972.1-201ENST00000402023 252 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AL133264.1-201ENST00000407157 562 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 RNA5SP56-201ENST00000410277 118 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 FCF1P2-201ENST00000415284 583 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 RAC1P8-201ENST00000427086 527 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AL591419.1-201ENST00000427423 339 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 HIGD1AP12-201ENST00000427832 281 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AL365396.1-201ENST00000430854 671 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC005345.1-201ENST00000431868 217 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC007389.2-201ENST00000434630 306 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 RPS20P32-201ENST00000456044 356 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 FTH1P9-201ENST00000513251 355 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 RNA5SP143-201ENST00000516936 115 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AP003385.6-201ENST00000531603 374 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC006518.1-201ENST00000541449 943 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 SULT1C2P1-202ENST00000562418 459 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC107954.1-201ENST00000565906 727 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC091057.3-201ENST00000602684 733 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 DPRXP5-201ENST00000604662 539 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AL365400.2-201ENST00000605604 902 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC005344.1-201ENST00000613391 459 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 AC022960.3-201ENST00000619794 441 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 NCAPGP1-201ENST00000505112 1814 ntBASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4BQ9Y4P1 EXOC5P1-201ENST00000510543 1969 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AL133383.2-201ENST00000622958 2336 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 SUGT1P1-201ENST00000379514 476 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 RNU6-730P-201ENST00000383954 104 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 RNA5SP424-201ENST00000390988 115 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 ATP5F1P4-201ENST00000397288 746 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 HSPE1P8-201ENST00000406997 288 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AL023807.1-201ENST00000407932 359 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 RN7SKP156-201ENST00000410308 342 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AL159169.1-201ENST00000421119 127 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 RPL7P53-201ENST00000421245 739 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC006548.1-201ENST00000427470 102 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 SETD6P1-201ENST00000444575 317 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 Z95327.1-201ENST00000446082 482 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 COX6CP18-201ENST00000448769 222 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 DNAJC19P1-201ENST00000455312 319 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 SNORA84-201ENST00000459229 133 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC069528.1-202ENST00000482888 637 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 VPS26AP1-201ENST00000483197 979 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 RN7SKP157-201ENST00000516174 282 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 MTCYBP23-201ENST00000558717 1102 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC006960.3-201ENST00000561845 705 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 MIR4509-3-201ENST00000578671 94 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 MIR4509-2-201ENST00000583920 94 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AL034351.1-201ENST00000605288 668 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC024060.1-201ENST00000607052 494 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC009237.15-201ENST00000610252 501 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 MIR4509-1-201ENST00000618224 94 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 AC123767.1-202ENST00000620407 817 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 CR381572.1-201ENST00000625098 102 ntBASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
ATG4BQ9Y4P1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms