Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RPL7P2-201ENST00000427639 268 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 USP9YP35-201ENST00000435696 412 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RPS26P30-201ENST00000443431 335 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RPL21P89-201ENST00000444021 467 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 Z95327.1-201ENST00000446082 482 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 PTMAP3-201ENST00000447474 330 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RPL23AP81-201ENST00000455252 467 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 SUMO2P2-201ENST00000456482 255 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 NCOR1P1-202ENST00000486162 291 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC139783.2-201ENST00000504847 1145 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC109464.2-201ENST00000510242 943 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RNA5SP73-201ENST00000516744 108 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC092747.2-201ENST00000545069 983 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AL352979.3-201ENST00000553515 247 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC084757.1-201ENST00000559987 490 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 CYP4A43P-201ENST00000568156 121 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC012435.1-202ENST00000568772 240 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 MIR4286-201ENST00000580651 93 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC068790.5-201ENST00000602741 355 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC128687.1-201ENST00000605304 619 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC016727.1-205ENST00000605437 569 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC069545.1-201ENST00000605671 358 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 TUG1_1.1-201ENST00000610654 145 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 MIR6875-201ENST00000617506 72 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 AC034229.5-201ENST00000624258 185 ntBASIC4.39□□□□□ -1.71
EBF3Q9H4W6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
EBF3Q9H4W6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC011266.1-201ENST00000624119 3569 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 OR10J6P-201ENST00000289731 930 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AL512430.2-201ENST00000406786 339 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 RNU2-66P-201ENST00000410650 161 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC007435.1-201ENST00000421086 415 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 EIF1P1-201ENST00000421436 341 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 EIF1P3-201ENST00000423841 334 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 USP9YP31-201ENST00000431405 881 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 BMS1P19-201ENST00000433925 393 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC079776.3-201ENST00000450665 370 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 RPL21P134-201ENST00000453468 483 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 RNU7-27P-201ENST00000459281 62 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 MTCO3P38-201ENST00000468910 766 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 RN7SL132P-201ENST00000478131 296 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 GAPDHP36-201ENST00000480688 918 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC109486.1-201ENST00000486833 374 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 UBA52P3-201ENST00000491303 382 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC147055.4-201ENST00000504399 745 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 RNU6-405P-201ENST00000516637 110 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC106038.2-201ENST00000520706 568 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 IGJP1-201ENST00000522682 475 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
EBF3Q9H4W6 NIFKP8-201ENST00000560500 874 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC124068.1-201ENST00000563131 678 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 BNIP3P33-201ENST00000598912 569 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC090525.3-201ENST00000605601 189 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AL031666.3-201ENST00000609320 1006 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC007684.1-201ENST00000609671 477 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.38□□□□□ -1.71
EBF3Q9H4W6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms